Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269166

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T174Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 176.1326
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 66.2913
3 ENSG00000155657 TTN titin 58.7945
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 57.5759
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 39.0823
6 ENSG00000167552 TUBA1A tubulin alpha 1a 28.0450
7 ENSG00000075624 ACTB actin beta 24.6778
8 ENSG00000133055 MYBPH myosin binding protein H 24.4988
9 ENSG00000159173 TNNI1 troponin I1, slow skeletal type 23.1530
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 21.9402

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285740 novel transcript -0.0708
58502 ENSG00000285739 novel transcript, antisense to NRG3 -0.0708
58501 ENSG00000285738 Novel transcript -0.0708
58500 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0708
58499 ENSG00000285736 Novel transcript -0.0708
58498 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0708
58497 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0708
58496 ENSG00000285733 novel protein -0.0708
58495 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0708
58494 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0708

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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