Human Omics database for
the Generation of iPS and Normal Cells
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All Modules
Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1269179
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1269179
Profile download
6000003010000000000000-738
Sequence Read Archive
SRP033135
SRP033135_T185
Pseudo-temporal ordering of individual cells reveals regulators of differentiation
Transcriptome
Myoblast_T48 (Skeletal muscle)
Human
Muscle
RNA-seq
HiSeq 2500
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000159251
ACTC1
actin alpha cardiac muscle 1
188.9275
2
ENSG00000167552
TUBA1A
tubulin alpha 1a
72.1304
3
ENSG00000155657
TTN
titin
47.3672
4
ENSG00000159173
TNNI1
troponin I1, slow skeletal type
29.6993
5
ENSG00000143632
ACTA1
actin alpha 1, skeletal muscle
28.2576
6
ENSG00000075624
ACTB
actin beta
24.7222
7
ENSG00000210082
MT-RNR2
mitochondrially encoded 16S rRNA
22.2428
8
ENSG00000133055
MYBPH
myosin binding protein H
19.5737
9
ENSG00000103994
ZNF106
zinc finger protein 106
18.9554
10
ENSG00000156508
EEF1A1
eukaryotic translation elongation factor 1 alpha 1
18.6799
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285738
Novel transcript
-0.0685
58502
ENSG00000285737
LINC02680
long intergenic non-protein coding RNA 2680
-0.0685
58501
ENSG00000285736
Novel transcript
-0.0685
58500
ENSG00000285735
LINC02717
long intergenic non-protein coding RNA 2717
-0.0685
58499
ENSG00000285734
novel transcript, antisense to CACNA1C
-0.0685
58498
ENSG00000285733
novel protein
-0.0685
58497
ENSG00000285732
novel transcript, antisense to ABCD2
-0.0685
58496
ENSG00000285731
Novel transcript, antisense to TBC1D5
-0.0685
58495
ENSG00000285729
novel transcript
-0.0685
58494
ENSG00000285728
novel transcript, antisense to PPIH
-0.0685
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
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