Human Omics database for
the Generation of iPS and Normal Cells
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All Modules
Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1269192
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1269192
Profile download
6000003010000000000000-738
Sequence Read Archive
SRP033135
SRP033135_T197
Pseudo-temporal ordering of individual cells reveals regulators of differentiation
Transcriptome
Myoblast_T48 (Skeletal muscle)
Human
Muscle
RNA-seq
HiSeq 2500
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000198791
CNOT7
CCR4-NOT transcription complex subunit 7
158.8047
2
ENSG00000155657
TTN
titin
101.4494
3
ENSG00000196628
TCF4
transcription factor 4
45.4693
4
ENSG00000183091
NEB
nebulin
44.4446
5
ENSG00000166963
MAP1A
microtubule associated protein 1A
43.8244
6
ENSG00000269968
novel transcript, antisense to GAPDH
41.2267
7
ENSG00000111640
GAPDH
glyceraldehyde-3-phosphate dehydrogenase
39.7167
8
ENSG00000127603
MACF1
microtubule actin crosslinking factor 1
37.4336
9
ENSG00000145391
SETD7
SET domain containing 7, histone lysine methyltransferase
32.4810
10
ENSG00000092054
MYH7
myosin heavy chain 7
30.2249
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285745
general transcription factor IIH subunit 5 (GTF2H5) pseudogene
-0.0303
58502
ENSG00000285744
novel transcript
-0.0303
58501
ENSG00000285742
novel transcript
-0.0303
58500
ENSG00000285741
novel transcript
-0.0303
58499
ENSG00000285740
novel transcript
-0.0303
58498
ENSG00000285739
novel transcript, antisense to NRG3
-0.0303
58497
ENSG00000285738
Novel transcript
-0.0303
58496
ENSG00000285737
LINC02680
long intergenic non-protein coding RNA 2680
-0.0303
58495
ENSG00000285736
Novel transcript
-0.0303
58494
ENSG00000285735
LINC02717
long intergenic non-protein coding RNA 2717
-0.0303
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
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