Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269210

Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM1269210 Profile download	6000003010000000000000-738	Sequence Read Archive	SRP033135	SRP033135_T215	Pseudo-temporal ordering of individual cells reveals regulators of differentiation	Transcriptome	Myoblast_T48 (Skeletal muscle)	Human	Muscle	RNA-seq	HiSeq 2500	Sequence

Histogram (Expression count)

Top 10 up-regulated genes

Rank	ENSG	Gene symbol	Description	Z-score
1	ENSG00000251562	MALAT1	metastasis associated lung adenocarcinoma transcript 1	100.3941
2	ENSG00000198804	MT-CO1	mitochondrially encoded cytochrome c oxidase I	84.3078
3	ENSG00000210082	MT-RNR2	mitochondrially encoded 16S rRNA	70.8936
4	ENSG00000156508	EEF1A1	eukaryotic translation elongation factor 1 alpha 1	56.0548
5	ENSG00000159251	ACTC1	actin alpha cardiac muscle 1	50.8878
6	ENSG00000075624	ACTB	actin beta	43.4029
7	ENSG00000137801	THBS1	thrombospondin 1	41.4162
8	ENSG00000113140	SPARC	secreted protein acidic and cysteine rich	39.6297
9	ENSG00000166710	B2M	beta-2-microglobulin	33.6002
10	ENSG00000184009	ACTG1	actin gamma 1	28.9722

Bottom 10 down-regulated genes

Rank	ENSG	Gene symbol	Description	Z-score
58503	ENSG00000285737	LINC02680	long intergenic non-protein coding RNA 2680	-0.1048
58502	ENSG00000285736		Novel transcript	-0.1048
58501	ENSG00000285735	LINC02717	long intergenic non-protein coding RNA 2717	-0.1048
58500	ENSG00000285734		novel transcript, antisense to CACNA1C	-0.1048
58499	ENSG00000285733		novel protein	-0.1048
58498	ENSG00000285732		novel transcript, antisense to ABCD2	-0.1048
58497	ENSG00000285731		Novel transcript, antisense to TBC1D5	-0.1048
58496	ENSG00000285730		novel transcript	-0.1048
58495	ENSG00000285729		novel transcript	-0.1048
58494	ENSG00000285727		novel transcript	-0.1048

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	Z-score

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