Human Omics database for
the Generation of iPS and Normal Cells
Release notes
Statistics
Document manuals
FAQ
All Modules
Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1269252
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1269252
Profile download
6000003010000000000000-738
Sequence Read Archive
SRP033135
SRP033135_T249
Pseudo-temporal ordering of individual cells reveals regulators of differentiation
Transcriptome
Myoblast_T72 (Skeletal muscle)
Human
Muscle
RNA-seq
HiSeq 2000
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000159251
ACTC1
actin alpha cardiac muscle 1
198.2565
2
ENSG00000075624
ACTB
actin beta
49.9636
3
ENSG00000167552
TUBA1A
tubulin alpha 1a
43.2621
4
ENSG00000210082
MT-RNR2
mitochondrially encoded 16S rRNA
30.2340
5
ENSG00000155657
TTN
titin
28.9843
6
ENSG00000107796
ACTA2
actin alpha 2, smooth muscle
28.1954
7
ENSG00000111640
GAPDH
glyceraldehyde-3-phosphate dehydrogenase
26.9691
8
ENSG00000159173
TNNI1
troponin I1, slow skeletal type
24.0011
9
ENSG00000156508
EEF1A1
eukaryotic translation elongation factor 1 alpha 1
23.3059
10
ENSG00000182718
ANXA2
annexin A2
22.0796
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285741
novel transcript
-0.0635
58502
ENSG00000285740
novel transcript
-0.0635
58501
ENSG00000285739
novel transcript, antisense to NRG3
-0.0635
58500
ENSG00000285738
Novel transcript
-0.0635
58499
ENSG00000285737
LINC02680
long intergenic non-protein coding RNA 2680
-0.0635
58498
ENSG00000285736
Novel transcript
-0.0635
58497
ENSG00000285735
LINC02717
long intergenic non-protein coding RNA 2717
-0.0635
58496
ENSG00000285734
novel transcript, antisense to CACNA1C
-0.0635
58495
ENSG00000285733
novel protein
-0.0635
58494
ENSG00000285732
novel transcript, antisense to ABCD2
-0.0635
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
Now loading...
