Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269261

Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM1269261 Profile download	6000003010000000000000-738	Sequence Read Archive	SRP033135	SRP033135_T258	Pseudo-temporal ordering of individual cells reveals regulators of differentiation	Transcriptome	Myoblast_T72 (Skeletal muscle)	Human	Muscle	RNA-seq	HiSeq 2000	Sequence

Histogram (Expression count)

Top 10 up-regulated genes

Rank	ENSG	Gene symbol	Description	Z-score
1	ENSG00000210082	MT-RNR2	mitochondrially encoded 16S rRNA	126.1843
2	ENSG00000251562	MALAT1	metastasis associated lung adenocarcinoma transcript 1	111.1462
3	ENSG00000198804	MT-CO1	mitochondrially encoded cytochrome c oxidase I	69.6064
4	ENSG00000198712	MT-CO2	mitochondrially encoded cytochrome c oxidase II	47.1166
5	ENSG00000113140	SPARC	secreted protein acidic and cysteine rich	43.8449
6	ENSG00000156508	EEF1A1	eukaryotic translation elongation factor 1 alpha 1	39.1686
7	ENSG00000182718	ANXA2	annexin A2	37.0071
8	ENSG00000115414	FN1	fibronectin 1	31.5402
9	ENSG00000198938	MT-CO3	mitochondrially encoded cytochrome c oxidase III	30.9263
10	ENSG00000198886	MT-ND4	mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4	29.0591

Bottom 10 down-regulated genes

Rank	ENSG	Gene symbol	Description	Z-score
58503	ENSG00000285730		novel transcript	-0.0919
58502	ENSG00000285729		novel transcript	-0.0919
58501	ENSG00000285727		novel transcript	-0.0919
58500	ENSG00000285726		novel transcript	-0.0919
58499	ENSG00000285725		novel transcript	-0.0919
58498	ENSG00000285724		novel transcript	-0.0919
58497	ENSG00000285723		novel protein	-0.0919
58496	ENSG00000285722		novel transcript	-0.0919
58494	ENSG00000285720		Putative protein FAM90A16P/FAM90A17P	-0.0919
10	ENSG00000198886	MT-ND4	mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4	29.0591

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	Z-score

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