Human Omics database for
the Generation of iPS and Normal Cells
Release notes
Statistics
Document manuals
FAQ
All Modules
Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1269270
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1269270
Profile download
6000003010000000000000-738
Sequence Read Archive
SRP033135
SRP033135_T266
Pseudo-temporal ordering of individual cells reveals regulators of differentiation
Transcriptome
Myoblast_T72 (Skeletal muscle)
Human
Muscle
RNA-seq
HiSeq 2000
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000210082
MT-RNR2
mitochondrially encoded 16S rRNA
107.7988
2
ENSG00000115414
FN1
fibronectin 1
46.1725
3
ENSG00000251562
MALAT1
metastasis associated lung adenocarcinoma transcript 1
46.1725
4
ENSG00000074590
NUAK1
NUAK family kinase 1
30.7659
5
ENSG00000120129
DUSP1
dual specificity phosphatase 1
30.7659
6
ENSG00000159251
ACTC1
actin alpha cardiac muscle 1
30.7659
7
ENSG00000169504
CLIC4
chloride intracellular channel 4
30.7659
8
ENSG00000185650
ZFP36L1
ZFP36 ring finger protein like 1
30.7659
9
ENSG00000198712
MT-CO2
mitochondrially encoded cytochrome c oxidase II
30.7659
10
ENSG00000258017
novel transcript, antisense to TUBA1B
30.7659
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285747
novel transcript
-0.0472
58502
ENSG00000285746
putative UPF0607 protein ENSP00000383144
-0.0472
58501
ENSG00000285745
general transcription factor IIH subunit 5 (GTF2H5) pseudogene
-0.0472
58500
ENSG00000285744
novel transcript
-0.0472
58499
ENSG00000285743
novel transcript, LINP1-LINC00707 readthrough
-0.0472
58498
ENSG00000285742
novel transcript
-0.0472
58497
ENSG00000285741
novel transcript
-0.0472
58496
ENSG00000285740
novel transcript
-0.0472
58495
ENSG00000285739
novel transcript, antisense to NRG3
-0.0472
58494
ENSG00000285738
Novel transcript
-0.0472
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
Now loading...
