SHOGoiN Cell Transcriptome: GSM1269281
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1269281 Profile download | 6000003010000000000000-738 | Sequence Read Archive | SRP033135 | SRP033135_T276 | Pseudo-temporal ordering of individual cells reveals regulators of differentiation | Transcriptome | Myoblast_T72 (Skeletal muscle) | Human | Muscle | RNA-seq | HiSeq 2000 | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 1 | ENSG00000103994 | ZNF106 | zinc finger protein 106 | 147.8019 |
| 2 | ENSG00000064787 | BCAS1 | breast carcinoma amplified sequence 1 | 45.9303 |
| 3 | ENSG00000159251 | ACTC1 | actin, alpha, cardiac muscle 1 | 36.2922 |
| 4 | ENSG00000155657 | TTN | titin | 34.8956 |
| 5 | ENSG00000100316 | RPL3 | ribosomal protein L3 | 34.0119 |
| 6 | ENSG00000156508 | EEF1A1 | eukaryotic translation elongation factor 1 alpha 1 | 33.5623 |
| 7 | ENSG00000118194 | TNNT2 | troponin T2, cardiac type | 32.9726 |
| 8 | ENSG00000096384 | HSP90AB1 | heat shock protein 90 alpha family class B member 1 | 32.2349 |
| 9 | ENSG00000169554 | ZEB2 | zinc finger E-box binding homeobox 2 | 32.0754 |
| 10 | ENSG00000106261 | ZKSCAN1 | zinc finger with KRAB and SCAN domains 1 | 30.6557 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 58735 | ENSG00000285994 | novel transcript, sense intronic to CAMK1D | -0.0529 | |
| 58734 | ENSG00000285993 | novel transcript, antisense to RNF165 | -0.0529 | |
| 58733 | ENSG00000285992 | novel transcript | -0.0529 | |
| 58732 | ENSG00000285991 | novel transcript | -0.0529 | |
| 58731 | ENSG00000285990 | neurobeachin (NBEA) pseudogene | -0.0529 | |
| 58730 | ENSG00000285989 | TEC | -0.0529 | |
| 58729 | ENSG00000285988 | novel transcript, LINP1-LINC00707 readthrough | -0.0529 | |
| 58728 | ENSG00000285987 | NA | -0.0529 | |
| 58727 | ENSG00000285986 | complement factor H related 3 (CFHR3) pseudogene | -0.0529 | |
| 58726 | ENSG00000285985 | NA | -0.0529 |
