Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1269281
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1269281
Profile download
6000003010000000000000-738
Sequence Read Archive
SRP033135
SRP033135_T276
Pseudo-temporal ordering of individual cells reveals regulators of differentiation
Transcriptome
Myoblast_T72 (Skeletal muscle)
Human
Muscle
RNA-seq
HiSeq 2000
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000103994
ZNF106
zinc finger protein 106
147.8019
2
ENSG00000064787
BCAS1
breast carcinoma amplified sequence 1
45.9303
3
ENSG00000159251
ACTC1
actin alpha cardiac muscle 1
36.2922
4
ENSG00000155657
TTN
titin
34.8956
5
ENSG00000100316
RPL3
ribosomal protein L3
34.0119
6
ENSG00000156508
EEF1A1
eukaryotic translation elongation factor 1 alpha 1
33.5623
7
ENSG00000118194
TNNT2
troponin T2, cardiac type
32.9726
8
ENSG00000096384
HSP90AB1
heat shock protein 90 alpha family class B member 1
32.2349
9
ENSG00000169554
ZEB2
zinc finger E-box binding homeobox 2
32.0754
10
ENSG00000106261
ZKSCAN1
zinc finger with KRAB and SCAN domains 1
30.6557
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285740
novel transcript
-0.0529
58502
ENSG00000285739
novel transcript, antisense to NRG3
-0.0529
58501
ENSG00000285738
Novel transcript
-0.0529
58500
ENSG00000285737
LINC02680
long intergenic non-protein coding RNA 2680
-0.0529
58499
ENSG00000285736
Novel transcript
-0.0529
58498
ENSG00000285735
LINC02717
long intergenic non-protein coding RNA 2717
-0.0529
58497
ENSG00000285734
novel transcript, antisense to CACNA1C
-0.0529
58496
ENSG00000285733
novel protein
-0.0529
58495
ENSG00000285732
novel transcript, antisense to ABCD2
-0.0529
58494
ENSG00000285731
Novel transcript, antisense to TBC1D5
-0.0529
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
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