Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269281

Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM1269281 Profile download	6000003010000000000000-738	Sequence Read Archive	SRP033135	SRP033135_T276	Pseudo-temporal ordering of individual cells reveals regulators of differentiation	Transcriptome	Myoblast_T72 (Skeletal muscle)	Human	Muscle	RNA-seq	HiSeq 2000	Sequence

Histogram (Expression count)

Top 10 up-regulated genes

Rank	ENSG	Gene symbol	Description	Z-score
1	ENSG00000103994	ZNF106	zinc finger protein 106	147.8019
2	ENSG00000064787	BCAS1	breast carcinoma amplified sequence 1	45.9303
3	ENSG00000159251	ACTC1	actin alpha cardiac muscle 1	36.2922
4	ENSG00000155657	TTN	titin	34.8956
5	ENSG00000100316	RPL3	ribosomal protein L3	34.0119
6	ENSG00000156508	EEF1A1	eukaryotic translation elongation factor 1 alpha 1	33.5623
7	ENSG00000118194	TNNT2	troponin T2, cardiac type	32.9726
8	ENSG00000096384	HSP90AB1	heat shock protein 90 alpha family class B member 1	32.2349
9	ENSG00000169554	ZEB2	zinc finger E-box binding homeobox 2	32.0754
10	ENSG00000106261	ZKSCAN1	zinc finger with KRAB and SCAN domains 1	30.6557

Bottom 10 down-regulated genes

Rank	ENSG	Gene symbol	Description	Z-score
58503	ENSG00000285740		novel transcript	-0.0529
58502	ENSG00000285739		novel transcript, antisense to NRG3	-0.0529
58501	ENSG00000285738		Novel transcript	-0.0529
58500	ENSG00000285737	LINC02680	long intergenic non-protein coding RNA 2680	-0.0529
58499	ENSG00000285736		Novel transcript	-0.0529
58498	ENSG00000285735	LINC02717	long intergenic non-protein coding RNA 2717	-0.0529
58497	ENSG00000285734		novel transcript, antisense to CACNA1C	-0.0529
58496	ENSG00000285733		novel protein	-0.0529
58495	ENSG00000285732		novel transcript, antisense to ABCD2	-0.0529
58494	ENSG00000285731		Novel transcript, antisense to TBC1D5	-0.0529

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	Z-score

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