Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1617401

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


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1010201000000000000000-213Sequence Read ArchiveSRP055440SRP055440_T4Single Cell Analysis Reveals Unexpected Transcriptional Heterogeneity of Neural Progenitors in the Developing Human CortexTranscriptomeRadial glia cell (Cerebral cortex)HumanBrainRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000120738 EGR1 early growth response 1 93.6399
2 ENSG00000170345 FOS Fos proto-oncogene, AP-1 transcription factor subunit 84.9733
3 ENSG00000075624 ACTB actin beta 46.8228
4 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 44.6689
5 ENSG00000177606 JUN Jun proto-oncogene, AP-1 transcription factor subunit 40.3079
6 ENSG00000184009 ACTG1 actin gamma 1 38.8024
7 ENSG00000106278 PTPRZ1 protein tyrosine phosphatase receptor type Z1 37.7346
8 ENSG00000125740 FOSB FosB proto-oncogene, AP-1 transcription factor subunit 32.5234
9 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 31.8931
10 ENSG00000026025 VIM vimentin 29.2068

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285604 novel transcript, antisense to TNFRSF8 -0.1823
58502 ENSG00000285603 novel transcript, antisense to GMDS -0.1823
58501 ENSG00000285601 novel transcript -0.1823
58500 ENSG00000285598 novel transcript -0.1823
58499 ENSG00000285594 LINC02856 long intergenic non-protein coding RNA 2856 -0.1823
58498 ENSG00000285593 novel transcript -0.1823
58497 ENSG00000285592 novel transcript -0.1823
58496 ENSG00000285590 Novel transcript -0.1823
58495 ENSG00000285586 novel transcript -0.1823
58494 ENSG00000285585 novel protein -0.1823

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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