Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1657883

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1657883


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T13A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 148.3364
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 88.2729
3 ENSG00000131711 MAP1B microtubule associated protein 1B 78.7573
4 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 43.4742
5 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 37.5346
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 37.4393
7 ENSG00000143933 CALM2 calmodulin 2 28.5471
8 ENSG00000189056 RELN reelin 28.5385
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 27.2137
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 26.9280

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0863
58502 ENSG00000285730 novel transcript -0.0863
58501 ENSG00000285729 novel transcript -0.0863
58500 ENSG00000285727 novel transcript -0.0863
58499 ENSG00000285726 novel transcript -0.0863
58498 ENSG00000285725 novel transcript -0.0863
58497 ENSG00000285724 novel transcript -0.0863
58496 ENSG00000285723 novel protein -0.0863
58495 ENSG00000285722 novel transcript -0.0863
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 26.9280

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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