Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1657890

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1657890


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T20A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000123560 PLP1 proteolipid protein 1 171.1008
2 ENSG00000150867 PIP4K2A phosphatidylinositol-5-phosphate 4-kinase type 2 alpha 64.1844
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 56.0244
4 ENSG00000070214 SLC44A1 solute carrier family 44 member 1 54.9764
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 49.8113
6 ENSG00000092964 DPYSL2 dihydropyrimidinase like 2 47.6410
7 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 38.8224
8 ENSG00000080822 CLDND1 claudin domain containing 1 32.3689
9 ENSG00000184226 PCDH9 protocadherin 9 23.7336
10 ENSG00000164124 TMEM144 transmembrane protein 144 22.2848

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285742 novel transcript -0.0479
58502 ENSG00000285741 novel transcript -0.0479
58501 ENSG00000285740 novel transcript -0.0479
58500 ENSG00000285739 novel transcript, antisense to NRG3 -0.0479
58499 ENSG00000285738 Novel transcript -0.0479
58498 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0479
58497 ENSG00000285736 Novel transcript -0.0479
58496 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0479
58495 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0479
58494 ENSG00000285733 novel protein -0.0479

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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