Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1657897

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1657897


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T27A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000123560 PLP1 proteolipid protein 1 142.5938
2 ENSG00000070214 SLC44A1 solute carrier family 44 member 1 72.0996
3 ENSG00000092964 DPYSL2 dihydropyrimidinase like 2 63.0850
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 55.8471
5 ENSG00000150867 PIP4K2A phosphatidylinositol-5-phosphate 4-kinase type 2 alpha 47.3632
6 ENSG00000143933 CALM2 calmodulin 2 32.3106
7 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 30.1570
8 ENSG00000080822 CLDND1 claudin domain containing 1 30.1108
9 ENSG00000187109 NAP1L1 nucleosome assembly protein 1 like 1 28.8802
10 ENSG00000039319 ZFYVE16 zinc finger FYVE-type containing 16 28.0495

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285745 general transcription factor IIH subunit 5 (GTF2H5) pseudogene -0.0636
58502 ENSG00000285744 novel transcript -0.0636
58501 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0636
58500 ENSG00000285742 novel transcript -0.0636
58499 ENSG00000285741 novel transcript -0.0636
58498 ENSG00000285740 novel transcript -0.0636
58497 ENSG00000285739 novel transcript, antisense to NRG3 -0.0636
58496 ENSG00000285738 Novel transcript -0.0636
58495 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0636
58494 ENSG00000285736 Novel transcript -0.0636

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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