Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1657901

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1657901


Profile download
1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T31A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000123560 PLP1 proteolipid protein 1 169.8592
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 70.0183
3 ENSG00000092964 DPYSL2 dihydropyrimidinase like 2 62.3663
4 ENSG00000150867 PIP4K2A phosphatidylinositol-5-phosphate 4-kinase type 2 alpha 53.8262
5 ENSG00000070214 SLC44A1 solute carrier family 44 member 1 38.3398
6 ENSG00000005893 LAMP2 lysosomal associated membrane protein 2 27.3849
7 ENSG00000197959 DNM3 dynamin 3 26.1501
8 ENSG00000064042 LIMCH1 LIM and calponin homology domains 1 25.1769
9 ENSG00000080822 CLDND1 claudin domain containing 1 24.2219
10 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 22.5066

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0601
58502 ENSG00000285742 novel transcript -0.0601
58501 ENSG00000285741 novel transcript -0.0601
58500 ENSG00000285740 novel transcript -0.0601
58499 ENSG00000285739 novel transcript, antisense to NRG3 -0.0601
58498 ENSG00000285738 Novel transcript -0.0601
58497 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0601
58496 ENSG00000285736 Novel transcript -0.0601
58495 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0601
58494 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0601

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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