Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1657906

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T36A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 68.2253
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 44.4195
3 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 43.6761
4 ENSG00000277443 MARCKS myristoylated alanine rich protein kinase C substrate 42.9812
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 37.3247
6 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 33.9793
7 ENSG00000105854 PON2 paraoxonase 2 32.3793
8 ENSG00000150867 PIP4K2A phosphatidylinositol-5-phosphate 4-kinase type 2 alpha 32.3793
9 ENSG00000184226 PCDH9 protocadherin 9 31.2480
10 ENSG00000106278 PTPRZ1 protein tyrosine phosphatase receptor type Z1 31.1833

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285736 Novel transcript -0.1213
58502 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1213
58501 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1213
58500 ENSG00000285733 novel protein -0.1213
58499 ENSG00000285732 novel transcript, antisense to ABCD2 -0.1213
58498 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.1213
58497 ENSG00000285730 novel transcript -0.1213
58496 ENSG00000285729 novel transcript -0.1213
58495 ENSG00000285728 novel transcript, antisense to PPIH -0.1213
58494 ENSG00000285727 novel transcript -0.1213

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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