Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1657913

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1657913


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T43A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 105.1218
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 51.1687
3 ENSG00000130066 SAT1 spermidine/spermine N1-acetyltransferase 1 46.6463
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 43.9045
5 ENSG00000106278 PTPRZ1 protein tyrosine phosphatase receptor type Z1 35.5374
6 ENSG00000144369 FAM171B family with sequence similarity 171 member B 32.5277
7 ENSG00000131711 MAP1B microtubule associated protein 1B 31.1096
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 30.9205
9 ENSG00000120738 EGR1 early growth response 1 30.2429
10 ENSG00000165029 ABCA1 ATP binding cassette subfamily A member 1 29.1084

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285736 Novel transcript -0.1057
58502 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1057
58501 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1057
58500 ENSG00000285733 novel protein -0.1057
58499 ENSG00000285732 novel transcript, antisense to ABCD2 -0.1057
58498 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.1057
58497 ENSG00000285730 novel transcript -0.1057
58496 ENSG00000285729 novel transcript -0.1057
58495 ENSG00000285728 novel transcript, antisense to PPIH -0.1057
58494 ENSG00000285727 novel transcript -0.1057

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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