Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1657918

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1657918


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T48A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000277443 MARCKS myristoylated alanine rich protein kinase C substrate 70.0675
2 ENSG00000066654 THUMPD1 THUMP domain containing 1 60.5292
3 ENSG00000177565 TBL1XR1 transducin beta like 1 X-linked receptor 1 52.6431
4 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 47.2290
5 ENSG00000175387 SMAD2 SMAD family member 2 45.6975
6 ENSG00000014824 SLC30A9 solute carrier family 30 member 9 43.6386
7 ENSG00000106278 PTPRZ1 protein tyrosine phosphatase receptor type Z1 43.2129
8 ENSG00000120694 HSPH1 heat shock protein family H (Hsp110) member 1 42.9333
9 ENSG00000038427 VCAN versican 40.4105
10 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 37.9449

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285745 general transcription factor IIH subunit 5 (GTF2H5) pseudogene -0.0621
58502 ENSG00000285744 novel transcript -0.0621
58501 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0621
58500 ENSG00000285742 novel transcript -0.0621
58499 ENSG00000285741 novel transcript -0.0621
58498 ENSG00000285740 novel transcript -0.0621
58497 ENSG00000285739 novel transcript, antisense to NRG3 -0.0621
58496 ENSG00000285738 Novel transcript -0.0621
58495 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0621
58494 ENSG00000285736 Novel transcript -0.0621

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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