Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1657931

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1657931


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T61A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 126.4118
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 92.0025
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 58.6444
4 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 53.2577
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 29.6087
6 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 27.2701
7 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 27.0993
8 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 24.5111
9 ENSG00000152583 SPARCL1 SPARC like 1 19.8995
10 ENSG00000087448 KLHL42 kelch like family member 42 19.3871

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285739 novel transcript, antisense to NRG3 -0.0838
58502 ENSG00000285738 Novel transcript -0.0838
58501 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0838
58500 ENSG00000285736 Novel transcript -0.0838
58499 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0838
58498 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0838
58497 ENSG00000285733 novel protein -0.0838
58496 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0838
58495 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0838
58494 ENSG00000285730 novel transcript -0.0838

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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