Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1657954

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T84A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 173.0739
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 41.0276
3 ENSG00000131711 MAP1B microtubule associated protein 1B 35.4332
4 ENSG00000143933 CALM2 calmodulin 2 35.1502
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 32.1679
6 ENSG00000224078 SNHG14 small nucleolar RNA host gene 14 24.7885
7 ENSG00000214548 MEG3 maternally expressed 3 24.0919
8 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 21.6321
9 ENSG00000270641 TSIX TSIX transcript, XIST antisense RNA 21.1097
10 ENSG00000229807 XIST X inactive specific transcript 19.7383

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285739 novel transcript, antisense to NRG3 -0.0926
58502 ENSG00000285738 Novel transcript -0.0926
58501 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0926
58500 ENSG00000285736 Novel transcript -0.0926
58499 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0926
58498 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0926
58497 ENSG00000285733 novel protein -0.0926
58496 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0926
58495 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0926
58494 ENSG00000285730 novel transcript -0.0926

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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