Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1657957

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1657957


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T87A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 94.4541
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 63.1048
3 ENSG00000092964 DPYSL2 dihydropyrimidinase like 2 49.6032
4 ENSG00000131711 MAP1B microtubule associated protein 1B 46.6910
5 ENSG00000189241 TSPYL1 TSPY like 1 39.5873
6 ENSG00000117632 STMN1 stathmin 1 39.3887
7 ENSG00000122566 HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 36.4987
8 ENSG00000096384 HSP90AB1 heat shock protein 90 alpha family class B member 1 35.4397
9 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 30.5200
10 ENSG00000184226 PCDH9 protocadherin 9 24.3207

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285728 novel transcript, antisense to PPIH -0.1454
58502 ENSG00000285727 novel transcript -0.1454
58501 ENSG00000285726 novel transcript -0.1454
58500 ENSG00000285724 novel transcript -0.1454
58499 ENSG00000285723 novel protein -0.1454
58498 ENSG00000285722 novel transcript -0.1454
58496 ENSG00000285720 Putative protein FAM90A16P/FAM90A17P -0.1454
58495 ENSG00000285719 novel transcript, antisense to CD34 -0.1454
58494 ENSG00000285718 novel transcript -0.1454
10 ENSG00000184226 PCDH9 protocadherin 9 24.3207

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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