Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1657958

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1657958


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T88A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 117.0076
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 61.6219
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 54.5384
4 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 35.2438
5 ENSG00000092964 DPYSL2 dihydropyrimidinase like 2 30.3626
6 ENSG00000109971 HSPA8 heat shock protein family A (Hsp70) member 8 29.7710
7 ENSG00000143933 CALM2 calmodulin 2 28.8013
8 ENSG00000118432 CNR1 cannabinoid receptor 1 26.2703
9 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 24.8076
10 ENSG00000132639 SNAP25 synaptosome associated protein 25 24.0187

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1406
58502 ENSG00000285733 novel protein -0.1406
58501 ENSG00000285732 novel transcript, antisense to ABCD2 -0.1406
58500 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.1406
58499 ENSG00000285730 novel transcript -0.1406
58498 ENSG00000285729 novel transcript -0.1406
58497 ENSG00000285727 novel transcript -0.1406
58496 ENSG00000285726 novel transcript -0.1406
58495 ENSG00000285725 novel transcript -0.1406
58494 ENSG00000285724 novel transcript -0.1406

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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