Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1657964

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T94A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 162.1318
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 73.2171
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 48.9971
4 ENSG00000214548 MEG3 maternally expressed 3 44.2787
5 ENSG00000144369 FAM171B family with sequence similarity 171 member B 40.6208
6 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 30.0692
7 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 26.6386
8 ENSG00000131711 MAP1B microtubule associated protein 1B 23.5110
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 21.7687
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 19.3770

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285744 novel transcript -0.0812
58502 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0812
58501 ENSG00000285742 novel transcript -0.0812
58500 ENSG00000285741 novel transcript -0.0812
58499 ENSG00000285740 novel transcript -0.0812
58498 ENSG00000285738 Novel transcript -0.0812
58497 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0812
58496 ENSG00000285736 Novel transcript -0.0812
58495 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0812
58494 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0812

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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