Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1657967

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1657967


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T97A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 135.3250
2 ENSG00000131711 MAP1B microtubule associated protein 1B 64.3464
3 ENSG00000092964 DPYSL2 dihydropyrimidinase like 2 53.2597
4 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 45.3774
5 ENSG00000177565 TBL1XR1 transducin beta like 1 X-linked receptor 1 37.5933
6 ENSG00000145495 MARCHF6 membrane associated ring-CH-type finger 6 36.8754
7 ENSG00000146469 VIP vasoactive intestinal peptide 33.8373
8 ENSG00000144369 FAM171B family with sequence similarity 171 member B 28.4943
9 ENSG00000096384 HSP90AB1 heat shock protein 90 alpha family class B member 1 23.7785
10 ENSG00000067715 SYT1 synaptotagmin 1 23.2646

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.1103
58502 ENSG00000285736 Novel transcript -0.1103
58501 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1103
58500 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1103
58499 ENSG00000285733 novel protein -0.1103
58498 ENSG00000285732 novel transcript, antisense to ABCD2 -0.1103
58497 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.1103
58496 ENSG00000285730 novel transcript -0.1103
58495 ENSG00000285729 novel transcript -0.1103
58494 ENSG00000285728 novel transcript, antisense to PPIH -0.1103

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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