Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1657996

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1657996


Profile download
1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T126A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqMiSeqSequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 106.4113
2 ENSG00000130066 SAT1 spermidine/spermine N1-acetyltransferase 1 68.5022
3 ENSG00000276070 CCL4L2 C-C motif chemokine ligand 4 like 2 61.4763
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 55.3058
5 ENSG00000132669 RIN2 Ras and Rab interactor 2 54.6490
6 ENSG00000118515 SGK1 serum/glucocorticoid regulated kinase 1 53.8701
7 ENSG00000276085 CCL3L1 C-C motif chemokine ligand 3 like 3 48.5549
8 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 47.3024
9 ENSG00000275302 CCL4 C-C motif chemokine ligand 4 37.8939
10 ENSG00000019582 CD74 CD74 molecule 36.3207

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0610
58502 ENSG00000285742 novel transcript -0.0610
58501 ENSG00000285741 novel transcript -0.0610
58500 ENSG00000285740 novel transcript -0.0610
58499 ENSG00000285739 novel transcript, antisense to NRG3 -0.0610
58498 ENSG00000285738 Novel transcript -0.0610
58497 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0610
58496 ENSG00000285736 Novel transcript -0.0610
58495 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0610
58494 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0610

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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