Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1657999

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1657999


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T129A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqMiSeqSequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 130.4810
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 92.7278
3 ENSG00000113369 ARRDC3 arrestin domain containing 3 56.9231
4 ENSG00000062716 VMP1 vacuole membrane protein 1 41.6770
5 ENSG00000277443 MARCKS myristoylated alanine rich protein kinase C substrate 36.7795
6 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 29.7634
7 ENSG00000173391 OLR1 oxidized low density lipoprotein receptor 1 28.6135
8 ENSG00000182141 ZNF708 zinc finger protein 708 27.6553
9 ENSG00000132475 H3-3B H3.3 histone B 27.5702
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 26.6758

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285745 general transcription factor IIH subunit 5 (GTF2H5) pseudogene -0.0580
58502 ENSG00000285744 novel transcript -0.0580
58501 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0580
58500 ENSG00000285742 novel transcript -0.0580
58499 ENSG00000285741 novel transcript -0.0580
58498 ENSG00000285740 novel transcript -0.0580
58497 ENSG00000285739 novel transcript, antisense to NRG3 -0.0580
58496 ENSG00000285738 Novel transcript -0.0580
58495 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0580
58494 ENSG00000285736 Novel transcript -0.0580

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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