Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1658004

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1658004


Profile download
1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T134A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqMiSeqSequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 149.3801
2 ENSG00000158859 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 56.6537
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 51.1146
4 ENSG00000241644 INMT indolethylamine N-methyltransferase 49.3597
5 ENSG00000100234 TIMP3 TIMP metallopeptidase inhibitor 3 48.9319
6 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 44.1826
7 ENSG00000026508 CD44 CD44 molecule (Indian blood group) 33.8504
8 ENSG00000011465 DCN decorin 32.3697
9 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S rRNA 32.1613
10 ENSG00000103196 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 31.0535

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285742 novel transcript -0.0637
58502 ENSG00000285741 novel transcript -0.0637
58501 ENSG00000285740 novel transcript -0.0637
58500 ENSG00000285739 novel transcript, antisense to NRG3 -0.0637
58499 ENSG00000285738 Novel transcript -0.0637
58498 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0637
58497 ENSG00000285736 Novel transcript -0.0637
58496 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0637
58495 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0637
58494 ENSG00000285733 novel protein -0.0637

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...