Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1658020

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1658020


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T150A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 99.8978
2 ENSG00000110436 SLC1A2 solute carrier family 1 member 2 98.8939
3 ENSG00000130066 SAT1 spermidine/spermine N1-acetyltransferase 1 78.7112
4 ENSG00000152583 SPARCL1 SPARC like 1 54.4764
5 ENSG00000120885 CLU clusterin 48.2842
6 ENSG00000105854 PON2 paraoxonase 2 44.2002
7 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 41.0060
8 ENSG00000144369 FAM171B family with sequence similarity 171 member B 38.8294
9 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 38.6058
10 ENSG00000079215 SLC1A3 solute carrier family 1 member 3 34.2525

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285742 novel transcript -0.0851
58502 ENSG00000285741 novel transcript -0.0851
58501 ENSG00000285740 novel transcript -0.0851
58500 ENSG00000285739 novel transcript, antisense to NRG3 -0.0851
58499 ENSG00000285738 Novel transcript -0.0851
58498 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0851
58497 ENSG00000285736 Novel transcript -0.0851
58496 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0851
58495 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0851
58494 ENSG00000285733 novel protein -0.0851

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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