Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1658042

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1658042


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T172A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 127.9884
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 97.9743
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 90.7814
4 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 60.2336
5 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 53.4390
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 51.8300
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 40.3756
8 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 38.8382
9 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 26.0456
10 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 25.0977

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0733
58502 ENSG00000285733 novel protein -0.0733
58501 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0733
58500 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0733
58499 ENSG00000285730 novel transcript -0.0733
58498 ENSG00000285729 novel transcript -0.0733
58497 ENSG00000285728 novel transcript, antisense to PPIH -0.0733
58496 ENSG00000285727 novel transcript -0.0733
58495 ENSG00000285726 novel transcript -0.0733
58494 ENSG00000285725 novel transcript -0.0733

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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