Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1658045

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1658045


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T175A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 143.4385
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 106.2136
3 ENSG00000110436 SLC1A2 solute carrier family 1 member 2 67.2256
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 55.8711
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 41.9327
6 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S rRNA 35.4322
7 ENSG00000130066 SAT1 spermidine/spermine N1-acetyltransferase 1 33.4410
8 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 30.9127
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 25.5015
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 24.6047

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0649
58502 ENSG00000285736 Novel transcript -0.0649
58501 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0649
58500 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0649
58499 ENSG00000285733 novel protein -0.0649
58498 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0649
58497 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0649
58496 ENSG00000285730 novel transcript -0.0649
58495 ENSG00000285729 novel transcript -0.0649
58494 ENSG00000285728 novel transcript, antisense to PPIH -0.0649

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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