Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1658047

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T177A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 106.9116
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 103.0798
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 37.9694
4 ENSG00000146469 VIP vasoactive intestinal peptide 36.5966
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 35.7367
6 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 35.0428
7 ENSG00000130066 SAT1 spermidine/spermine N1-acetyltransferase 1 30.6981
8 ENSG00000096384 HSP90AB1 heat shock protein 90 alpha family class B member 1 30.1701
9 ENSG00000014641 MDH1 malate dehydrogenase 1 26.9719
10 ENSG00000131711 MAP1B microtubule associated protein 1B 25.6141

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.1147
58502 ENSG00000285736 Novel transcript -0.1147
58501 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1147
58500 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1147
58499 ENSG00000285733 novel protein -0.1147
58498 ENSG00000285732 novel transcript, antisense to ABCD2 -0.1147
58497 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.1147
58496 ENSG00000285729 novel transcript -0.1147
58495 ENSG00000285728 novel transcript, antisense to PPIH -0.1147
58494 ENSG00000285727 novel transcript -0.1147

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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