Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1658055

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1658055


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T185A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 169.0771
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 124.6287
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 61.0445
4 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 54.0876
5 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 40.6589
6 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 38.8318
7 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 38.1584
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 33.0638
9 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 27.0138
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 23.7852

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285740 novel transcript -0.0199
58502 ENSG00000285739 novel transcript, antisense to NRG3 -0.0199
58501 ENSG00000285738 Novel transcript -0.0199
58500 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0199
58499 ENSG00000285736 Novel transcript -0.0199
58498 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0199
58497 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0199
58496 ENSG00000285733 novel protein -0.0199
58495 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0199
58494 ENSG00000285730 novel transcript -0.0199

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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