Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1658060

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1658060


Profile download
1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T190A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 98.3176
2 ENSG00000130066 SAT1 spermidine/spermine N1-acetyltransferase 1 90.9942
3 ENSG00000110436 SLC1A2 solute carrier family 1 member 2 88.9868
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 67.0223
5 ENSG00000144369 FAM171B family with sequence similarity 171 member B 61.4437
6 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 42.0177
7 ENSG00000135821 GLUL glutamate-ammonia ligase 39.9344
8 ENSG00000152583 SPARCL1 SPARC like 1 33.6264
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 33.0370
10 ENSG00000171885 AQP4 aquaporin 4 28.1703

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0964
58502 ENSG00000285733 novel protein -0.0964
58501 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0964
58500 ENSG00000285730 novel transcript -0.0964
58499 ENSG00000285729 novel transcript -0.0964
58498 ENSG00000285728 novel transcript, antisense to PPIH -0.0964
58497 ENSG00000285727 novel transcript -0.0964
58496 ENSG00000285726 novel transcript -0.0964
58495 ENSG00000285725 novel transcript -0.0964
58494 ENSG00000285724 novel transcript -0.0964

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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