Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1658064

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1658064


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T194A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 114.4770
2 ENSG00000110436 SLC1A2 solute carrier family 1 member 2 113.1703
3 ENSG00000144369 FAM171B family with sequence similarity 171 member B 65.5108
4 ENSG00000171885 AQP4 aquaporin 4 60.5690
5 ENSG00000152583 SPARCL1 SPARC like 1 49.8698
6 ENSG00000135821 GLUL glutamate-ammonia ligase 48.5393
7 ENSG00000120885 CLU clusterin 41.3088
8 ENSG00000092964 DPYSL2 dihydropyrimidinase like 2 37.9826
9 ENSG00000079215 SLC1A3 solute carrier family 1 member 3 35.8048
10 ENSG00000153904 DDAH1 dimethylarginine dimethylaminohydrolase 1 23.7830

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0785
58502 ENSG00000285736 Novel transcript -0.0785
58501 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0785
58500 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0785
58499 ENSG00000285733 novel protein -0.0785
58498 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0785
58497 ENSG00000285730 novel transcript -0.0785
58496 ENSG00000285729 novel transcript -0.0785
58495 ENSG00000285728 novel transcript, antisense to PPIH -0.0785
58494 ENSG00000285727 novel transcript -0.0785

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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