Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1658074

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1658074


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T204A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 138.4780
2 ENSG00000130066 SAT1 spermidine/spermine N1-acetyltransferase 1 51.7301
3 ENSG00000131711 MAP1B microtubule associated protein 1B 51.0892
4 ENSG00000110436 SLC1A2 solute carrier family 1 member 2 40.8561
5 ENSG00000092964 DPYSL2 dihydropyrimidinase like 2 34.3841
6 ENSG00000171951 SCG2 secretogranin II 33.5162
7 ENSG00000067715 SYT1 synaptotagmin 1 32.9865
8 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 30.7787
9 ENSG00000044574 HSPA5 heat shock protein family A (Hsp70) member 5 26.6748
10 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 23.7771

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285720 Putative protein FAM90A16P/FAM90A17P -0.1298
58502 ENSG00000285719 novel transcript, antisense to CD34 -0.1298
58501 ENSG00000285718 novel transcript -0.1298
58500 ENSG00000285717 novel transcript -0.1298
58499 ENSG00000285716 novel transcript -0.1298
58498 ENSG00000285715 novel transcript, antisense to TACC2 -0.1298
58497 ENSG00000285714 novel transcript -0.1298
58496 ENSG00000285713 novel transcript -0.1298
58495 ENSG00000285712 novel transcript -0.1298
58494 ENSG00000285711 LINC02835 long intergenic non-protein coding RNA 2835 -0.1298

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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