Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1658078

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1658078


Profile download
1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T208A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000110436 SLC1A2 solute carrier family 1 member 2 124.9089
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 97.5826
3 ENSG00000152583 SPARCL1 SPARC like 1 74.8150
4 ENSG00000120885 CLU clusterin 65.3505
5 ENSG00000144369 FAM171B family with sequence similarity 171 member B 51.1063
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 45.5327
7 ENSG00000171885 AQP4 aquaporin 4 40.4534
8 ENSG00000135821 GLUL glutamate-ammonia ligase 38.4133
9 ENSG00000079215 SLC1A3 solute carrier family 1 member 3 37.0304
10 ENSG00000150625 GPM6A glycoprotein M6A 31.0151

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285739 novel transcript, antisense to NRG3 -0.0707
58502 ENSG00000285738 Novel transcript -0.0707
58501 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0707
58500 ENSG00000285736 Novel transcript -0.0707
58499 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0707
58498 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0707
58497 ENSG00000285733 novel protein -0.0707
58496 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0707
58495 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0707
58494 ENSG00000285730 novel transcript -0.0707

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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