Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1658094

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1658094


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T224A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 164.5286
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 66.5945
3 ENSG00000166710 B2M beta-2-microglobulin 62.9959
4 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 57.7312
5 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S rRNA 44.2991
6 ENSG00000130066 SAT1 spermidine/spermine N1-acetyltransferase 1 43.0255
7 ENSG00000120738 EGR1 early growth response 1 37.3239
8 ENSG00000109971 HSPA8 heat shock protein family A (Hsp70) member 8 33.3920
9 ENSG00000178878 APOLD1 apolipoprotein L domain containing 1 30.2006
10 ENSG00000148175 STOM stomatin 20.9670

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285739 novel transcript, antisense to NRG3 -0.0622
58502 ENSG00000285738 Novel transcript -0.0622
58501 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0622
58500 ENSG00000285736 Novel transcript -0.0622
58499 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0622
58498 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0622
58497 ENSG00000285733 novel protein -0.0622
58496 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0622
58495 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0622
58494 ENSG00000285730 novel transcript -0.0622

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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