Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1658096

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1658096


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T226A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 153.5054
2 ENSG00000011465 DCN decorin 58.5470
3 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 54.7537
4 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S rRNA 43.1126
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 40.7789
6 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 38.3912
7 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 26.5608
8 ENSG00000166710 B2M beta-2-microglobulin 26.2545
9 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 25.0381
10 ENSG00000105894 PTN pleiotrophin 23.4163

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285744 novel transcript -0.0733
58502 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0733
58501 ENSG00000285742 novel transcript -0.0733
58500 ENSG00000285741 novel transcript -0.0733
58499 ENSG00000285740 novel transcript -0.0733
58498 ENSG00000285739 novel transcript, antisense to NRG3 -0.0733
58497 ENSG00000285738 Novel transcript -0.0733
58496 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0733
58495 ENSG00000285736 Novel transcript -0.0733
58494 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0733

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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