Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1658102

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1658102


Profile download
1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T232A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000133392 MYH11 myosin heavy chain 11 112.4073
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 84.0220
3 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 73.7681
4 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 66.4693
5 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 60.0428
6 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S rRNA 42.5078
7 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 33.5712
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 30.6873
9 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 28.2040
10 ENSG00000108654 DDX5 DEAD-box helicase 5 27.6699

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285745 general transcription factor IIH subunit 5 (GTF2H5) pseudogene -0.0656
58502 ENSG00000285744 novel transcript -0.0656
58501 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0656
58500 ENSG00000285742 novel transcript -0.0656
58499 ENSG00000285741 novel transcript -0.0656
58498 ENSG00000285740 novel transcript -0.0656
58497 ENSG00000285739 novel transcript, antisense to NRG3 -0.0656
58496 ENSG00000285738 Novel transcript -0.0656
58495 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0656
58494 ENSG00000285736 Novel transcript -0.0656

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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