Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1658109

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1658109


Profile download
1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T239A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000123560 PLP1 proteolipid protein 1 90.1138
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 87.8482
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 60.5245
4 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 55.7516
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 49.3776
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 43.3359
7 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 38.0494
8 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 33.5181
9 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 33.5030
10 ENSG00000166598 HSP90B1 heat shock protein 90 beta family member 1 29.1077

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285738 Novel transcript -0.0888
58502 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0888
58501 ENSG00000285736 Novel transcript -0.0888
58500 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0888
58499 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0888
58498 ENSG00000285733 novel protein -0.0888
58497 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0888
58496 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0888
58495 ENSG00000285729 novel transcript -0.0888
58494 ENSG00000285728 novel transcript, antisense to PPIH -0.0888

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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