Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1658110

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1658110


Profile download
1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T240A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 72.8758
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 48.9459
3 ENSG00000131711 MAP1B microtubule associated protein 1B 48.8616
4 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 44.6992
5 ENSG00000120738 EGR1 early growth response 1 39.9300
6 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 39.3739
7 ENSG00000156298 TSPAN7 tetraspanin 7 36.1552
8 ENSG00000198668 CALM1 calmodulin 1 34.3183
9 ENSG00000177565 TBL1XR1 transducin beta like 1 X-linked receptor 1 33.0544
10 ENSG00000123901 GPR83 G protein-coupled receptor 83 32.2286

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1273
58502 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1273
58501 ENSG00000285733 novel protein -0.1273
58500 ENSG00000285732 novel transcript, antisense to ABCD2 -0.1273
58499 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.1273
58498 ENSG00000285730 novel transcript -0.1273
58497 ENSG00000285729 novel transcript -0.1273
58496 ENSG00000285728 novel transcript, antisense to PPIH -0.1273
58495 ENSG00000285727 novel transcript -0.1273
58494 ENSG00000285726 novel transcript -0.1273

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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