Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1658126

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1658126


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T256A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 135.6654
2 ENSG00000120738 EGR1 early growth response 1 68.9803
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 62.4275
4 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 48.1647
5 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S rRNA 41.5518
6 ENSG00000132475 H3-3B H3.3 histone B 34.6534
7 ENSG00000166710 B2M beta-2-microglobulin 34.5632
8 ENSG00000143248 RGS5 regulator of G protein signaling 5 32.3539
9 ENSG00000087086 FTL ferritin light chain 30.3850
10 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 29.1376

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285746 putative UPF0607 protein ENSP00000383144 -0.0644
58502 ENSG00000285745 general transcription factor IIH subunit 5 (GTF2H5) pseudogene -0.0644
58501 ENSG00000285744 novel transcript -0.0644
58500 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0644
58499 ENSG00000285742 novel transcript -0.0644
58498 ENSG00000285741 novel transcript -0.0644
58497 ENSG00000285740 novel transcript -0.0644
58496 ENSG00000285739 novel transcript, antisense to NRG3 -0.0644
58495 ENSG00000285738 Novel transcript -0.0644
58494 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0644

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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