Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1658141

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T271A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 87.0682
2 ENSG00000189056 RELN reelin 59.1688
3 ENSG00000096384 HSP90AB1 heat shock protein 90 alpha family class B member 1 59.1239
4 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 49.1277
5 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 46.4097
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 44.0510
7 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 42.9503
8 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 40.9399
9 ENSG00000109971 HSPA8 heat shock protein family A (Hsp70) member 8 36.6943
10 ENSG00000131711 MAP1B microtubule associated protein 1B 35.1780

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1342
58502 ENSG00000285733 novel protein -0.1342
58501 ENSG00000285732 novel transcript, antisense to ABCD2 -0.1342
58500 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.1342
58499 ENSG00000285730 novel transcript -0.1342
58498 ENSG00000285729 novel transcript -0.1342
58497 ENSG00000285728 novel transcript, antisense to PPIH -0.1342
58496 ENSG00000285727 novel transcript -0.1342
58495 ENSG00000285726 novel transcript -0.1342
58494 ENSG00000285725 novel transcript -0.1342

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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