Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1658142

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1658142


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T272A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 165.0897
2 ENSG00000123560 PLP1 proteolipid protein 1 96.6524
3 ENSG00000110436 SLC1A2 solute carrier family 1 member 2 71.8314
4 ENSG00000092964 DPYSL2 dihydropyrimidinase like 2 41.1643
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 25.8606
6 ENSG00000242808 SOX2-OT SOX2 overlapping transcript 24.5238
7 ENSG00000080822 CLDND1 claudin domain containing 1 21.7504
8 ENSG00000151914 DST dystonin 20.0744
9 ENSG00000152583 SPARCL1 SPARC like 1 19.7352
10 ENSG00000079215 SLC1A3 solute carrier family 1 member 3 17.7400

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285738 Novel transcript -0.0777
58502 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0777
58501 ENSG00000285736 Novel transcript -0.0777
58500 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0777
58499 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0777
58498 ENSG00000285733 novel protein -0.0777
58497 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0777
58496 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0777
58495 ENSG00000285730 novel transcript -0.0777
58494 ENSG00000285729 novel transcript -0.0777

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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