Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1658143

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1658143


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T273A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 174.9221
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 54.5612
3 ENSG00000131711 MAP1B microtubule associated protein 1B 47.8752
4 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 44.8807
5 ENSG00000144369 FAM171B family with sequence similarity 171 member B 34.6581
6 ENSG00000143933 CALM2 calmodulin 2 30.1018
7 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 29.5985
8 ENSG00000145495 MARCHF6 membrane associated ring-CH-type finger 6 21.7508
9 ENSG00000189241 TSPYL1 TSPY like 1 20.0987
10 ENSG00000122566 HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 19.7631

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285736 Novel transcript -0.0884
58502 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0884
58501 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0884
58500 ENSG00000285733 novel protein -0.0884
58499 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0884
58498 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0884
58497 ENSG00000285730 novel transcript -0.0884
58496 ENSG00000285729 novel transcript -0.0884
58495 ENSG00000285728 novel transcript, antisense to PPIH -0.0884
58494 ENSG00000285727 novel transcript -0.0884

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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