Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1658147

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1658147


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T277A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 75.4922
2 ENSG00000092964 DPYSL2 dihydropyrimidinase like 2 48.5269
3 ENSG00000131711 MAP1B microtubule associated protein 1B 44.0837
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 43.1261
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 40.6748
6 ENSG00000096384 HSP90AB1 heat shock protein 90 alpha family class B member 1 35.6187
7 ENSG00000189241 TSPYL1 TSPY like 1 32.3247
8 ENSG00000132639 SNAP25 synaptosome associated protein 25 32.0566
9 ENSG00000198668 CALM1 calmodulin 1 30.7160
10 ENSG00000143933 CALM2 calmodulin 2 30.5819

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285726 novel transcript -0.1563
58502 ENSG00000285725 novel transcript -0.1563
58501 ENSG00000285724 novel transcript -0.1563
58500 ENSG00000285723 novel protein -0.1563
58499 ENSG00000285722 novel transcript -0.1563
58497 ENSG00000285720 Putative protein FAM90A16P/FAM90A17P -0.1563
58496 ENSG00000285719 novel transcript, antisense to CD34 -0.1563
58495 ENSG00000285718 novel transcript -0.1563
58494 ENSG00000285717 novel transcript -0.1563
10 ENSG00000143933 CALM2 calmodulin 2 30.5819

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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