Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1658154

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T284A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 94.1480
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 45.6367
3 ENSG00000156103 MMP16 matrix metallopeptidase 16 33.7521
4 ENSG00000012660 ELOVL5 ELOVL fatty acid elongase 5 32.2057
5 ENSG00000168214 RBPJ recombination signal binding protein for immunoglobulin kappa J region 30.8157
6 ENSG00000106278 PTPRZ1 protein tyrosine phosphatase receptor type Z1 30.6246
7 ENSG00000277443 MARCKS myristoylated alanine rich protein kinase C substrate 28.4527
8 ENSG00000197020 ZNF100 zinc finger protein 100 27.2538
9 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 26.5241
10 ENSG00000046653 GPM6B glycoprotein M6B 26.4198

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285741 novel transcript -0.0946
58502 ENSG00000285740 novel transcript -0.0946
58501 ENSG00000285739 novel transcript, antisense to NRG3 -0.0946
58500 ENSG00000285738 Novel transcript -0.0946
58499 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0946
58498 ENSG00000285736 Novel transcript -0.0946
58497 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0946
58496 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0946
58495 ENSG00000285733 novel protein -0.0946
58494 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0946

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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