Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1658162

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1658162


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T292A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000123560 PLP1 proteolipid protein 1 151.1239
2 ENSG00000173786 CNP 2',3'-cyclic nucleotide 3' phosphodiesterase 70.3602
3 ENSG00000092964 DPYSL2 dihydropyrimidinase like 2 61.9292
4 ENSG00000150867 PIP4K2A phosphatidylinositol-5-phosphate 4-kinase type 2 alpha 52.7329
5 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 50.7537
6 ENSG00000184226 PCDH9 protocadherin 9 35.3807
7 ENSG00000197971 MBP myelin basic protein 29.4970
8 ENSG00000165566 AMER2 APC membrane recruitment protein 2 28.4028
9 ENSG00000143933 CALM2 calmodulin 2 27.3922
10 ENSG00000164124 TMEM144 transmembrane protein 144 24.7613

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285742 novel transcript -0.0711
58502 ENSG00000285741 novel transcript -0.0711
58501 ENSG00000285740 novel transcript -0.0711
58500 ENSG00000285739 novel transcript, antisense to NRG3 -0.0711
58499 ENSG00000285738 Novel transcript -0.0711
58498 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0711
58497 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0711
58496 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0711
58495 ENSG00000285733 novel protein -0.0711
58494 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0711

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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