Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1658177

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T307A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 106.5130
2 ENSG00000131711 MAP1B microtubule associated protein 1B 57.3721
3 ENSG00000144369 FAM171B family with sequence similarity 171 member B 44.0526
4 ENSG00000143933 CALM2 calmodulin 2 43.4729
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 37.5971
6 ENSG00000092964 DPYSL2 dihydropyrimidinase like 2 37.1887
7 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 31.8003
8 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 30.2853
9 ENSG00000270641 TSIX TSIX transcript, XIST antisense RNA 29.5607
10 ENSG00000229807 XIST X inactive specific transcript 29.4816

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285738 Novel transcript -0.1215
58502 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.1215
58501 ENSG00000285736 Novel transcript -0.1215
58500 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1215
58499 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1215
58498 ENSG00000285733 novel protein -0.1215
58497 ENSG00000285732 novel transcript, antisense to ABCD2 -0.1215
58496 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.1215
58495 ENSG00000285730 novel transcript -0.1215
58494 ENSG00000285729 novel transcript -0.1215

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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