Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1658183

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T313A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000277443 MARCKS myristoylated alanine rich protein kinase C substrate 123.5629
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 76.2990
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 43.4995
4 ENSG00000131711 MAP1B microtubule associated protein 1B 33.5656
5 ENSG00000116147 TNR tenascin R 33.3134
6 ENSG00000124193 SRSF6 serine and arginine rich splicing factor 6 32.2947
7 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 30.2769
8 ENSG00000064787 BCAS1 breast carcinoma amplified sequence 1 30.1702
9 ENSG00000092964 DPYSL2 dihydropyrimidinase like 2 29.7434
10 ENSG00000108654 DDX5 DEAD-box helicase 5 28.9770

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285739 novel transcript, antisense to NRG3 -0.0973
58502 ENSG00000285738 Novel transcript -0.0973
58501 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0973
58500 ENSG00000285736 Novel transcript -0.0973
58499 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0973
58498 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0973
58497 ENSG00000285733 novel protein -0.0973
58496 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0973
58495 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0973
58494 ENSG00000285730 novel transcript -0.0973

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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