Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1658191

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1658191


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1010201030000000000000Sequence Read ArchiveSRP057196SRP057196_T321A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex (temporal lobe))HumanBrainRNA-seqMiSeqSequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 190.6928
2 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 59.5350
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 53.5845
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 30.6467
5 ENSG00000110436 SLC1A2 solute carrier family 1 member 2 29.1652
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 26.3752
7 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 26.1530
8 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 22.3259
9 ENSG00000105854 PON2 paraoxonase 2 21.9308
10 ENSG00000130066 SAT1 spermidine/spermine N1-acetyltransferase 1 21.7333

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0440
58502 ENSG00000285742 novel transcript -0.0440
58501 ENSG00000285741 novel transcript -0.0440
58500 ENSG00000285740 novel transcript -0.0440
58499 ENSG00000285739 novel transcript, antisense to NRG3 -0.0440
58498 ENSG00000285738 Novel transcript -0.0440
58497 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0440
58496 ENSG00000285736 Novel transcript -0.0440
58495 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0440
58494 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0440

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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