Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1658203

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1658203


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1010201000000000000000Sequence Read ArchiveSRP057196SRP057196_T333A survey of human brain transcriptome diversity at the single cell levelTranscriptomeCerebral cortex cell (Cerebral cortex)HumanBrainRNA-seqMiSeqSequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 65.3497
2 ENSG00000169045 HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 63.0085
3 ENSG00000120738 EGR1 early growth response 1 62.3262
4 ENSG00000176887 SOX11 SRY-box transcription factor 11 57.0551
5 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 56.2123
6 ENSG00000277443 MARCKS myristoylated alanine rich protein kinase C substrate 51.6235
7 ENSG00000131711 MAP1B microtubule associated protein 1B 39.5963
8 ENSG00000144369 FAM171B family with sequence similarity 171 member B 36.7601
9 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 35.9708
10 ENSG00000167552 TUBA1A tubulin alpha 1a 34.4590

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285741 novel transcript -0.1107
58502 ENSG00000285740 novel transcript -0.1107
58501 ENSG00000285739 novel transcript, antisense to NRG3 -0.1107
58500 ENSG00000285738 Novel transcript -0.1107
58499 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.1107
58498 ENSG00000285736 Novel transcript -0.1107
58497 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1107
58496 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1107
58495 ENSG00000285733 novel protein -0.1107
58494 ENSG00000285732 novel transcript, antisense to ABCD2 -0.1107

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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